Changes between Version 3 and Version 4 of ontAnnotPropQueries


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Timestamp:
01/27/11 15:23:16 (8 years ago)
Author:
detwiler
Comment:

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  • ontAnnotPropQueries

    v3 v4  
    33This page was created to provide a single access point grouping together the queries referenced from the Ontology Annotation grant proposal. 
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    5 1. '''NeuroFMA query:''' This view query produces a sub-ontology, from the FMA, restricted to neuro-anatomy. For those neuro-anatomical concepts, it includes all relevant properties and attributes. (Note: This is an extensive query and may take 30min+ to execute).  
    6  * View and/or execute this query in the Query Manager: http://axon.biostr.washington.edu:8080/QueryManager/QueryManager.html#qid=50 
     51. '''SLF connectivity query:''' This vSPARQL query accesses the FMA to determine the anatomical locations of gray matter regions connected by the right SLF. The query identifies parts of the Right SLF which contain the projects_from and projects_to relationships to gray matter regions. It then identifies the larger AAL-annotated regions of which these connected regions are part. In addition to the FMA identifiers, the associated AAL IDs and labels are also returned (as RDF). 
     6 * View and/or execute this query in the Query Manager: http://axon.biostr.washington.edu:8080/QueryManager/QueryManager.html#qid=97 
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    9 2. '''Temporal lobe parts query:''' This query starts at the temporal lobe, in the FMA, and recursively follows either regional_part or constitutional_part properties (the alternation) to their terminations. It then creates a set of all of the classes reached. 
    10  * View and/or execute this query in the Query Manager: http://axon.biostr.washington.edu:8080/QueryManager/QueryManager.html#qid=114 
     92. '''AIM web service query:''' This DXQuery calls the SLF connectivity query to get the AAL IDs of (super) gray matter regions connected by the right SLF. It uses the AAL IDs as parameters to the AIM web service which returns an AIM XML annotation of the mean z-score for each given region. 
     10 * View and/or execute this query in the Query Manager: http://axon.biostr.washington.edu:8080/QueryManager/QueryManager.html#qid=102 
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