Human Studies Database (HSDB) is a collaborative project headed by Ida Sim at UCSF, and including SIG (Todd Detwiler and Jim Brinkley).

This page is mostly links of interest.

General information

• Main public Wiki page ​https://hsdbwiki.org/index.php/HSDB_Wiki

• Members only Wiki ​http://sites.google.com/site/hsdbwiki/

OCRe ontology

• Google code site: ​http://code.google.com/p/ontology-of-clinical-research/

• SVN: ​http://ontology-of-clinical-research.googlecode.com/svn/trunk/

Data acquisition

XML-based

• Data acquistion tool developed at Wash U
  • ​http://hsdb.wustl.edu/webcontent/HSDB_release_1.1/readme.txt
  • ​http://hsdb.wustl.edu/webcontent/HSDB_release_1.1/HSDBWeb.zip

• XSD and sample XML file similar to what will be output by the data acquisition tool
  • ​https://sites.google.com/site/hsdbwiki/Home/data-acquisition/ocre-xsd

RDF-based

• RDF instance editing or management tools
  • ​http://vitro.mannlib.cornell.edu/
  • ​http://jastor.sourceforge.net/