Changes between Initial Version and Version 1 of FMAInOWL


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Timestamp:
12/11/07 12:50:02 (10 years ago)
Author:
detwiler
Comment:

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  • FMAInOWL

    v1 v1  
     1= FMA in OWL = 
     2 
     3This page contains some information regarding the conversion of the FMA into OWL full as performed by Natasha Noy at Stanford Center for Biomedical Informatics Research (BMIR). 
     4 
     5== Download == 
     6The following page from the NCBO wiki contains a white paper detailing the conversion of the FMA into OWL full. It also contains download links to the FMA OWL ontology as well as the application used to generate it. 
     7 
     8http://www.bioontology.org/wiki/index.php/FMAInOwl  
     9 
     10== Additional Instructions: == 
     11To open the FMA in OWL (these instructions are in addition to those found on the NCBO wiki): 
     12 * unzip both files in the same directory 
     13 * start Protege, giving it as much memory as you can (ideally 1.6G) 
     14 * ask it to open the file fmaOwlFullComponent_2_0.owl 
     15 * at some point it will come back with a dialog saying that it cannot find the imported ontology -- click "Add repository" 
     16 * in the wizard that follows, select the "Local file" and on the next screen, point it to the fmaOwlDlComponent_2_0.owl file 
     17 
     18It will takes about 40 minutes to open, but after that things are fast.