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Ticket Resolution Summary Owner Reporter
#14 fixed Parsing color input as numbers fails ebmoore ebmoore

java.lang.NumberFormatException?: For input string: ",255,0"

at java.lang.NumberFormatException?.forInputString(NumberFormatException?.java:48) at java.lang.Integer.parseInt( at java.lang.Integer.parseInt( at edu.washington.biostr.sig.brainj3d.colors.Colors.getColor( at at$1.labelAdded(LabelAttributes?.java:136) at at edu.washington.biostr.sig.brainj3d.view3D.MapSurface3DView.setData( at at at edu.washington.biostr.sig.brainj3d.core.server.RunData?.run(RunData?.java:40) at java.util.concurrent.ThreadPoolExecutor?$Worker.runTask(ThreadPoolExecutor?.java:650) at java.util.concurrent.ThreadPoolExecutor?$ at

#15 fixed SaxonWebService and other webapps use perm gen space joshuadf joshuadf

When redeploying webapps, in some (many?) cases the ClassLoader created for the old deployment still references some objects and so will never be garbage collected. This eventually makes Tomcat throw java.lang.OutOfMemoryError: PermGen space .

You can increace permgen space with the undocumented JAVA_OPTS="-XX:PermSize=128m -XX:MaxPermSize=256m"

#18 fixed SaxonWebService should automatically reload changed documents. ebmoore ebmoore

The only way to reload the document is to restart the service. This causes redeployment problems with PermGen? space. It would be better to reload the documents without redeploying the service.

This should be done with timestamps for efficiency.

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